I agree with the sentiment that there shouldn't be any rewards for teams with NT players, even with 2 players of my own in the NT pool (one starting).
There is a risk of injury currently, so that justifies some salary coverage. It'd be just as well to have the NT system run in arcade mode w/o injuries and taking away the salary benefit.
Mostly, I think everyone agrees that the NT system in HT is broken and has negatively affected the game overall. Just keep the salary adjustments minor and it should cover that concern.
"Well, no ones gonna top that." - http://tinyurl.com/noigttt